Greg Hood
Senior Computer Scientist,
National Resource for Biomedical
Supercomputing
Pittsburgh Supercomputing Center
Office:
Pittsburgh Supercomputing Center
300 S. Craig St. -- Rm. 420
Pittsburgh, PA 15213
Telephone: 412-268-7063
Fax:
412-268-8200
E-mail:
ghood@psc.edu
Current Projects:
Image Alignment of Large-Scale EM Datasets (with Art Wetzel at PSC and the Reid group at Harvard Univ.)
Resolution Limits for Fluorescence Tomographic Molecular Imaging (with Chris Badea & Steve Zhang at Duke University)
Antiretrovirals and Spread of HIV Drug Resistance (with the Abbas group
at the Cleveland Clinic Foundation)
Past Projects:
C. elegans volume data alignment (a
component of PSC's
Volume Browser project)
GENESIS
NEOSIM (NEural Open
SIMulation)
Computational
Neuroscience Course on the Access Grid
Real-time
Functional MRI
Tracking the
Human
Brain
Selected Software (that I have
written or contributed to):
PGENESIS
FIASCO - Functional Image
Analysis Software Computational Olio
Useful Programs
for Recording Access Grid Sessions
pmap - Hybrid Container
Extensions to the C++ STL
Selected Publications:
- Abbas UL, Hood G, Wetzel AW, Mellors JW. (2011). Factors Influencing the Emergence and Spread of HIV Drug Resistance Arising from Rollout of Antiretroviral Pre-Exposure Prophylaxis (PrEP). PLoS ONE 6(4): e18165. doi:10.1371/journal.pone.0018165
- Bock, D.D., Lee, W.A., Kerlin, A.M., Andermann, M.L,
Hood, G., Wetzel, A.W., Yurgenson, S., Soucy, E.R., Kim, H.S., & Reid, R.C. (2011).
Network anatomy and in vivo physiology of visual cortical neurons,
Nature, Vol. 471, 177-182 (available
online).
- Zhang, X., Badea, C.T, Hood, G., Wetzel, A.W., Stiles, J.R., and Johnson, G.A. (2010). Free-space fluorescence tomography with adaptive sampling based on anatomical information from microCT. Proceedings of SPIE, Multimodal Biomedical Imaging V, Vol. 7557. DOI: 10.1117/12.841891
- Hood, G., Using
P-GENESIS for Parallel Simulation of GENESIS Models - A Brief Overview,
Brains, Mind & Media, Vol. 1, bmm227 (urn:nbn:de:0009-3-2271),
published Nov. 21, 2005 (available online).
- Hood, G., Burkardt, J., Foss, G., Visualizing the Visual
System,
Neurocomputing, 32-33(1-4):801-808, 2000.
- Goddard, N.H., Hood, G., Cohen, J.D., Nystrom, L.E., Eddy, W.F.,
Genovese, C.R., and Noll, D.C., Functional Magnetic Resonance
Imaging
Dataset Analysis,
in Industrial Strength Parallel Computing, Koniges, A.E. (Ed),
Morgan Kaufmann, San Francisco, 2000.
- Goddard, N.H. and Hood, G. Large-Scale Simulation using
Parallel
GENESIS,
in The Book of GENESIS, 2nd ed., Bower, J.M. and Beeman, D.
(Eds), Springer-Verlag,
1998.
- Goddard, N.H., Hood, G., Cohen, J.D., Eddy, W.F., Genovese, C.R.,
Noll,
D.C. and Nystrom, L.E., Online Analysis of Functional MRI Datasets
on
Parallel Platforms, J. Supercomputing, 11:295-318, 1997.
Useful Links